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Product Number Product Name Molecular Formula Cas. No.

FC 8210

Azidocoumarin-spacer-6-amine
formate

C14H15N5O6 

None Assigned 

Notes

A profluorophore from our Click-mates TM collection which provides strong fluorescence upon cycloaddition with an alkyne.

FC 8215

Azidocoumarin-spacer-12-maleimide

C21H21N5O8 

None Assigned 

Notes

A profluorophore from our Click-mates TM collection which provides strong fluorescence upon cycloaddition with an alkyne.

FD 13001

Diazaindacene N-
hydroxysuccinimide ester

C21H21N3O6 

1027512-35-1 

Description

Lightner and co-workers1-3 reported the synthesis and spectroscopic properties of fluorophores based on the 3a,4a-diazaindacene ring system ("xanthglows"). Key properties include a high quantum yield (>0.9) and a large Stokes shift (>100 nm). Berry & Associates offers an amine-reactive version, Diazaindacene NHS Ester, for incorporation of the diazaindacene fluorophore into biomolecules.

Download Product Information.



Spectroscopic properties: The absorption maximum of the corresponding carboxylic acid is reported to be 425 nm in methanol, extinction coefficient = 15,300. The emission maximum of the carboxylic acid is 535 nm in methanol with a quantum yield of 0.91.1 When installed onto a 5'-amino-modified oligonucleotide,4 the absorption and emission maxima appear at 430 nm and 530 nm, respectively, in aqueous MgCl2/KCl/Tris-HCl (pH 8.0). For comparison, an analogous TET-labeled oligonucleotide showed absorption and emission maxima at 522 nm and 538 nm, respectively.

1. Brower, J. O.; Lightner, D. A. J. Org. Chem. 2002, 67, 2713-2716.

2. Boiadjiev, S. E.; Lightner, D. A. J. Phys. Org. Chem. 2004, 17, 675-679.

3. Woydziak, Z. R.; Boiadjiev, S. E.; Norona, W. S.; McDohagh, A. F.; Lightner, D. A. J. Org. Chem. 2005, 70, 8417-8423.

4. We thank Professor Salvatore A. E. Marras for these data.

Notes

A useful fluorophore exhibiting an emission maxiumum at 530-535 nm, a large Stokes shift, and a high quantum yield.

Alternate Name(s):

3a,4a-Diaza-4,5-dioxo-7-ethyl-3a,4,4a,5-tetrahydro-1,3,6-trimethyl-s-indacen-2-yl-acetic acid, N-hydroxysuccinimide ester

FD 13005

Water soluble dansyl-TEG azide

C23H34N5NaO8S2 

None Assigned 

Description

For a complete listing of our reagents for click chemistry, please see our Click-matesTM Collection page.

The purchase of these products for use in applications relating to copper catalyzed azide-alkyne cycloaddition chemistry (“Click Chemistry”) includes a limited, nontransferable license to intellectual property owned by TSRI to use this product solely for internal non-commercial research activities and specifically excludes clinical, therapeutic, or diagnostic use in humans or animals. Information regarding a license for commercial use in Click Chemistry may be obtained directly from The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, CA 92037, or by contacting 858-784-8140 or click@scripps.edu.

Notes

Useful tool from our Click-matesTM collection for ligation of a water soluble dansyl group via Saudinger ligation or click chemistry.

Alternate Name(s):

4-Dansyl-(4-aza-7,10,13-trioxa-15-azido)pentadecylsulfonate

FF 6000

5-Carboxyfluorescein

C21H12O7 

76823-03-5 

FF 6010

6-Carboxyfluorescein

C21H12O7 

3301-79-9 

FF 6015

6-Carboxyfluorescein dipivalate

C31H28O9 

192374-17-7 

FF 6020

6-Carboxyfluorescein diacetate

C25H16O9 

3348-03-6 

FF 6030

5-Carboxyfluorescein diacetate

C25H16O9 

79955-27-4 

FF 6040

6-Carboxyfluorescein diacetate N-
Hydroxysuccinimide Ester

C29H19NO11 

150206-15-8 

FF 6050

5-Carboxyfluorescein diacetate N-
Hydroxysuccinimide Ester

C29H19NO11 

150206-05-6 

FF 6060

6-Carboxyfluorescein N-
Hydroxysuccinimide Ester

C25H15NO9 

92557-81-8 

FF 6070

5-Carboxyfluorescein N-
Hydroxysuccinimide Ester

C25H15NO9 

92557-80-7 

FF 6080

6-Carboxyfluorescein dipivalate
N-Hydroxysuccinimide
Ester

C35H31NO11 

197850-75-2 

FF 6090

5-Carboxyfluorescein dipivalate
N-Hydroxysuccinimide
Ester

C35H31NO11 

186032-65-5 

FF 6100

N-(6-Hydroxyhexyl)-6-
carboxamidofluorescein dipivalate

C37H14NO9 

467455-27-2 

FF 6110

6-Carboxyfluorescein-TEG azide

C29H28N4O9 

412319-45-0 

Description

For a complete listing of our reagents for click chemistry, please see our Click-matesTM Collection page.

The purchase of these products for use in applications relating to copper catalyzed azide-alkyne cycloaddition chemistry (“Click Chemistry”) includes a limited, nontransferable license to intellectual property owned by TSRI to use this product solely for internal non-commercial research activities and specifically excludes clinical, therapeutic, or diagnostic use in humans or animals. Information regarding a license for commercial use in Click Chemistry may be obtained directly from The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, CA 92037, or by contacting 858-784-8140 or click@scripps.edu.

Notes

Useful fluorescein azide from our Click-matesTM collection for fluorescein incorporation via Staudinger ligation or click chemistry.

Alternate Name(s):

6-FAM-TEG azide

FF 6120

6-Carboxyfluorescein-dipivalate
TEG azide

C39H44N4O11 

1254709-11-9 

Description

For a complete listing of our reagents for click chemistry, please see our Click-matesTM Collection page.

The purchase of these products for use in applications relating to copper catalyzed azide-alkyne cycloaddition chemistry (“Click Chemistry”) includes a limited, nontransferable license to intellectual property owned by TSRI to use this product solely for internal non-commercial research activities and specifically excludes clinical, therapeutic, or diagnostic use in humans or animals. Information regarding a license for commercial use in Click Chemistry may be obtained directly from The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, CA 92037, or by contacting 858-784-8140 or click@scripps.edu.

Notes

Useful fluorescein azide from our Click-matesTM collection for fluorescein incorporation via Staudinger ligation or click chemistry.

Alternate Name(s):

6-FAM-dipivalate-TEG azide

FF 6130

6-TET-TEG azide

C29H24Cl4N4O9 

1333145-22-4 

Description

For a complete listing of our reagents for click chemistry, please see our Click-matesTM Collection page.

The purchase of these products for use in applications relating to copper catalyzed azide-alkyne cycloaddition chemistry (“Click Chemistry”) includes a limited, nontransferable license to intellectual property owned by TSRI to use this product solely for internal non-commercial research activities and specifically excludes clinical, therapeutic, or diagnostic use in humans or animals. Information regarding a license for commercial use in Click Chemistry may be obtained directly from The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, CA 92037, or by contacting 858-784-8140 or click@scripps.edu.

Notes

Useful fluorescein azide from our Click-matesTM collection for tetrachloro-fluorescein incorporation via Staudinger ligation or click chemistry.

Alternate Name(s):

TET-PEG3 azide

6-Carboxy-2',4,7,7'-tetrachlorofluorescein-TEG azide

FF 6150

5-Carboxy-TET

C21H8Cl4O7 

155911-13-0 

Alternate Name(s):

2',4,7,7'-Tetrachlorofluorescein-5-carboxylic acid

FF 6155

5-Carboxy-TET dipivalate N-
hydroxysuccinimide ester

C35H27Cl4NO11 

None Assigned 

FF 6160

6-Carboxy-TET

C21H8Cl4O7 

155911-14-1 

Alternate Name(s):

2',4,7,7'-Tetrachlorofluorescein-6-carboxylic acid

FL 1000

FDMT-N6-Bz-dA
CEP

C57H55F17N7O7P 

865758-44-7 and 865758-49-2 

Description

Learn about fluorous affinity purification of oligonucleotides here. Download a brief overview here.

Notes

Fluorous-tagged nucleosides are useful for the purification of oligonucleotides. Use with Fluoro-Pak™ Columns (FP 7210 or FP 7220) and Loading Buffer (LB 7100 ).

Alternate Name(s):

5'-O-FDMT-N6-benzoyl-2'-deoxyadenosine CEP

N6-Benzoyl-3'-O-[(diisopropylamino)(2-cyanoethoxy)phosphino]-5'-O-[4,4'-dimethoxy-4"-(1H,1H,2H,2H-perfluorodecyl)trityl]-2'-deoxyadenosine

FL 1100

FDMT-N4-Bz-dC
CEP

C56H55F17N5O8P 

865758-45-8 and 865758-50-5 

Description

Learn about fluorous affinity purification of oligonucleotides here. Download a brief overview here.

Notes

Fluorous-tagged nucleosides are useful for the purification of oligonucleotides. Use with Fluoro-Pak™ Columns (FP 7210 or FP 7220) and Loading Buffer (LB 7100 ).

Alternate Name(s):

5'-O-FDMT-N4-benzoyl-2'-deoxycytidine CEP

N4-Benzoyl-3'-O-[(diisopropylamino)(2-cyanoethoxy)phosphino]-5'-O-[4,4'-dimethoxy-4"-(1H,1H,2H,2H-perfluorodecyl)trityl]-2'-deoxycytidine

FL 1200

FDMT-N2-iBu-dG
CEP

C54H57F17N7O8P 

865758-46-9 and 865758-51-6 

Description

Learn about fluorous affinity purification of oligonucleotides here. Download a brief overview here.

Notes

Fluorous-tagged nucleosides are useful for the purification of oligonucleotides. Use with Fluoro-Pak™ Columns (FP 7210 or FP 7220) and Loading Buffer (LB 7100 ).

Alternate Name(s):

5'-O-FDMT-N2-isobutyryl-2'-deoxyguanosine CEP

3'-O-[(Diisopropylamino)(2-cyanoethoxy)phosphino]-5'-O-[4,4'-dimethoxy-4"-(1H,1H,2H,2H-perfluorodecyl)trityl]-N2-isobutyryl-2'-deoxyguanosine

FL 1220

FMMT-N2-iBu-dG
CEP

C53H55F17O7P 

None Assigned 

Description

Download Product Information. Fluorous-tagged phosphoramidites are useful for the purification of oligonucleotides. Use with Fluoro-Pak™ Columns (FP 7210 or FP 7220) and Loading Buffer (LB 7100 ); see "Fluorous Purification of Oligonucleotides", which is included in with your purchase or may be downloaded.

Learn about fluorous affinity purification of oligonucleotides here, or download a brief overview here.

Notes

This monomer bears a fluorous-tagged monomethoxytrityl (FMMT) group rather than a fluorous-tagged dimethoxytrityl (FDMT) group, and is for applications where a more robust 5-terminal purification tag is needed.

Alternate Name(s):

3'-O-[(Diisopropylamino)(2-cyanoethoxy)phosphino]-5'-O-[4-methoxy-4-(1H,1H,2H,2H-perfluorodecyl)trityl]-N2-isobutyryl-2'-deoxyguanosine



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